SIONlib  1.6.1
Scalable I/O library for parallel access to task-local files
sion_omp_gen.c
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1 /****************************************************************************
2 ** SIONLIB http://www.fz-juelich.de/jsc/sionlib **
3 *****************************************************************************
4 ** Copyright (c) 2008-2014 **
5 ** Forschungszentrum Juelich, Juelich Supercomputing Centre **
6 ** **
7 ** See the file COPYRIGHT in the package base directory for details **
8 ****************************************************************************/
17 #include <stdlib.h>
18 #include <stdio.h>
19 #include <stdarg.h>
20 #include <string.h>
21 #include <time.h>
22 
23 #include <sys/time.h>
24 
25 #include <sys/types.h>
26 #include <fcntl.h>
27 
28 #include <unistd.h>
29 
30 #include "omp.h"
31 
32 #include "sion.h"
33 #include "sion_debug.h"
34 #include "sion_internal.h"
35 #include "sion_fd.h"
36 #include "sion_filedesc.h"
37 #include "sion_printts.h"
38 #include "sion_flags.h"
39 
40 #include "sion_generic.h"
41 
42 #include "sion_omp.h"
43 #include "sion_omp_internal_gen.h"
44 #include "sion_omp_cb_gen.h"
45 #include "sion_lock.h"
46 
47 
48 #ifdef SION_OMP
49 
50 
51 sion_int32 _sion_omp_api_aid = -1;
52 static omp_lock_t _sion_omp_lock_data;
53 
54 int _sion_omp_user_lock(void * data) {
55  int rc=SION_SUCCESS;
56  omp_set_lock(&_sion_omp_lock_data);
57  return(rc);
58 }
59 int _sion_omp_user_unlock(void * data) {
60  int rc=SION_SUCCESS;
61  omp_unset_lock(&_sion_omp_lock_data);
62  return(rc);
63 }
64 
82 int sion_paropen_omp(const char *fname,
83  const char *file_mode,
84  sion_int64 *chunksize,
85  sion_int32 *fsblksize,
86  int *globalrank,
87  FILE **fileptr,
88  char **newfname)
89 {
90  int sid = SION_ID_UNDEF;
91  int filenumber, num_threads, thread_num;
92  int numFiles=1,gtasks, gRank, lRank, lSize;
93  _omp_api_commdata *gen_gcomm;
94  _sion_flags_store* flags_store = NULL;
95 
96  thread_num = omp_get_thread_num();
97  num_threads = omp_get_num_threads();
98 
99  #pragma omp master
100  {
101  _sion_debug_set_query_thread_num_function(omp_get_thread_num);
102  omp_init_lock(&_sion_omp_lock_data);
103  sion_lock_register_lock_callbacks(_sion_omp_user_lock,_sion_omp_user_unlock,&_sion_omp_lock_data);
104  }
105  {
106  #pragma omp barrier
107  }
108 
109  DPRINTFP((1, "sion_paropen_omp", thread_num, "enter parallel open of file %s\n", fname));
110 
111  flags_store = _sion_parse_flags(file_mode);
112  if ( ! flags_store ) {
113  return(_sion_errorprint_omp(SION_ID_NOT_VALID,_SION_ERROR_RETURN,
114  "sion_paropen_omp: could not parse file mode in %s, aborting ...\n", file_mode));
115  }
116 
117  if (flags_store->mask&_SION_FMODE_WRITE) {
118  /* file mode WRITE */
119  *globalrank = thread_num;
120  }
121  _sion_flags_destroy_store(flags_store);
122 
123  #pragma omp master
124  {
125  /* register callbacks for generic interface */
126  if(_sion_omp_api_aid<0) _sion_omp_api_aid=_sion_register_callbacks_omp();
127  }
128 
129  /* create generic communicator container */
130  gen_gcomm = (_omp_api_commdata *) malloc(sizeof(_omp_api_commdata));
131  if (gen_gcomm == NULL) {
132  return(_sion_errorprint(SION_ID_NOT_VALID,_SION_ERROR_RETURN,
133  "cannot allocate omp internal data structure of size %lu (_omp_api_commdata), aborting ...\n",
134  (unsigned long) sizeof(_omp_api_commdata)));
135  }
136  gen_gcomm->commset=1;
137  gen_gcomm->thread_num=thread_num;
138  gen_gcomm->num_threads=num_threads;
139 
140  /* sync to ensure that aid is accessible */
141  _sion_omp_barrier_cb(gen_gcomm);
142 
143 
144  lRank=gRank=thread_num;
145  lSize=gtasks=num_threads;
146  filenumber=0;
147  numFiles=1;
148 
149  DPRINTFP((1, "sion_paropen_omp", gRank, "enter parallel open of %d files (current name %s) in %s mode\n", numFiles, fname, file_mode));
150  sid = sion_generic_paropen(_sion_omp_api_aid, fname, file_mode, chunksize, fsblksize, gen_gcomm, gRank, gtasks,
151  &filenumber, &numFiles, &lRank, &lSize, fileptr, newfname);
152  DPRINTFP((1, "sion_paropen_omp", gRank, "leave parallel open of %d files in %s mode #tasks=%d sid=%d\n", numFiles, file_mode, lSize, sid));
153 
154 
155  /* test return code from internal open */
156  if ( sid == SION_ID_NOT_VALID ) {
157  return(_sion_errorprint_omp(SION_ID_NOT_VALID,_SION_ERROR_RETURN,"sion_paropen_omp: invalid return code from internal open %d", sid));
158  }
159 
160  DPRINTFP((1, "sion_paropen_omp", thread_num, "leave parallel open of file %s sid=%d\n", fname, sid));
161 
162  return (sid);
163 }
164 
171 int sion_parclose_omp(int sid)
172 {
173  int rc = SION_SUCCESS;
174  ONLY_DEBUG(int thread_num;)
175  _sion_filedesc *sion_filedesc;
176 
177  if ( (sid<0) || (_sion_vcdtype(sid) != SION_FILEDESCRIPTOR) || !(sion_filedesc = _sion_vcdtovcon(sid))) {
178  return(_sion_errorprint_omp(SION_NOT_SUCCESS,_SION_ERROR_RETURN,"sion_parclose_omp: invalid sion_filedesc %d", sid));
179  }
180 
181  ONLY_DEBUG(thread_num = omp_get_thread_num();)
182 
183  if(omp_get_num_threads()!=sion_filedesc->ntasks){
184  return(_sion_errorprint_omp(SION_NOT_SUCCESS,_SION_ERROR_RETURN,
185  "sion_parclose_omp: invalid number of OpenMP threads, %d <> %d",
186  omp_get_num_threads(), sion_filedesc->ntasks));
187  }
188 
189  DPRINTFP((1, "sion_parclose_omp", thread_num, "enter parallel close of sid %d\n", sid));
190  DPRINTFP((1, "sion_parclose_omp", thread_num, "closing %d file(s)\n", sion_filedesc->nfiles));
191 
192  rc = sion_generic_parclose(sid);
193 
194  DPRINTFP((1, "sion_parclose_omp", thread_num, "leave parallel close of sid %d rc=%d\n", sid, rc));
195  return rc;
196 }
197 
198 /* end of ifdef OMP */
199 #endif
Sion File Descriptor Structure.
Definition: sion_filedesc.h:72
int sion_generic_paropen(int aid, const char *fname, const char *file_mode, sion_int64 *chunksize, sion_int32 *fsblksize, void *gcommgroup, int grank, int gsize, int *filenumber, int *numfiles, const int *lrank, const int *lsize, FILE **fileptr, char **newfname)
Open a sion file a generic interface.
Definition: sion_generic.c:347
int sion_lock_register_lock_callbacks(int lock(void *), int unlock(void *), void *lock_data)
Function which registers callback funtions for lock and unlock internal access to shared data structu...
Definition: sion_common.c:1140
_sion_flags_store * _sion_parse_flags(const char *flags)
Parse flags and return a flags store with key value pairs.
Definition: sion_flags.c:285
Sion Time Stamp Header.